HLA3D

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Pipeline

Risk Alignment for Transplant

Antigenic Peptides Prediction

Choose prediction methods

Structure Alignment

3DHLAMatch (Structural differences between HLA molecules)

Sequence Alignment

Clustalw2 (Sequence differences between HLA molecules)

3D-View

3Dmol (Molecular differences in HLA structure)

Risk Report

Risk Sites (Non-permissive HLA mismatch amino acid sites)

Submission details

Past protein sequences in FASTA fomat

Or,upload a file:

HLA Allele: Aligened Allele: Gene Pair:

Upload:

Select PDB file

Input HLA Protein :

Location:

Chain:

Residue:

Risk Position: Alignment Position:

Note：If you use this service, please consider citing the following publication:
The EMBL-EBI search and sequence analysis tools APIs in 2019

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3Dmol

Note：For publication of results, please cite:
Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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